Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936282.1_cds_XP_016481916.1_73196
CDS Infomation

[gene=LOC107802853] [db_xref=GeneID:107802853] [protein=voltage-dependent T-type calcium channel subunit alpha-1G-like isoform X2] [protein_id=XP_016481916.1] [location=join(7050..7281,8640..8752,8861..9232,10254..10977,11268..11335)] [gbkey=CDS]
Sequence

ATGGGGAAGGGAGAAGAAGAGCAATCAGCAGGTACTCCATTGGATGCACAGAGTACACAC
CAAAATGCAGAGGATAGGTGCAGGGGATGCAGTAGGTTAAAGGGGCTGTTGAGTTTTAAA
TGTGTATTTGTATTGCTGCTTGGTATGGGAGTTTTGCTTTCTGCTATTTTCTTATTACCA
TTTTTCAAGAATGGAGATCTGGGGTATCTGGATCTTGACAACAAATATAAAGGTCATGAT
ATAGTTGCCAGTTTCATGCTTGAGAAGCCAGTTCCCTTTGTGAAGGATCACATTGTGCAA
CTTGCAGATGATATTTTTGATGAAATAAGTGTTTCCAATACTAAAGTGGAGATAATATCA
TTGGAAAATATAGCTGGATCGAACATAACGGAGGTTGTCTTTGCAGTTGATTCTGCAGTG
AAAAATATAAGGGTCTCTCTAACTGCTCTGAGTTTAGTCAGGTCAGAATTTGAAACTGTG
ATTACTGGCCAATCAGCCCTGCACTTGACAGCATCTTTGTTTGGCGATCCTTTTTCCTTT
GATGTGCTGAAATTCAGAGGTGGGATTACTGTGAGCCCTAAACAGAGCGGATTCCTCATG
CAGCAAGTCCAGATTCTTTTCAACTTCACCTTGAACTTCTCAATTGATGAAATTCAAGAT
AATTTTCATGAACTAACAAGCCAGCTCAAATCAGGGTTACATCTTTCATCATATGAGAAC
TTGTACATCAGCTTGACAAATACAAGAGGTTCAACGGTAGATCCTCCCACTATTGTTCAG
TGTAAAGTCCTTTTATCAGTTGGGATAAATTCCACCAGGTCAAGGTTGAAGCAGTTGTCT
CAGACCATTGGTTCTCATTCGGACAACCTTGGCCTCAATAACACCGTATTTGGAAGGGTT
AAACAAGTTAGCCTGTCCTCTTTTCTACCGCATTCTCGAGGTGGTGATAGTGGTAGCCCG
TCACCTTCTCCAGCTCCTCTACCCCATCACCATTACCACCATCACCACCACCACAATCGA
GATTCAAATCTCGCTCCTGCAATATCACCTGCTCCAAAAGTTGAGAGAGGTGGATCTATT
AGCAGGAAAATTTCACCTATATACGCCCCAGTACCAGCATCTGTAACAATACTTGCACCT
GCCCCTACACCTGCAAAGCACAAGAGTCATGAGGCCCAACCTCCTTGTCATTTTGGGAGA
TATCCAAGAAAGGCGAAGAGTCGCTCGCATATGGTTCCTTCTCGAGCACCAATCCGTGCA
CCTCATATTATTCCCTCGCCGCACCAGCAAATACATGCTCCAGATCCTATTCCACACGGA
CTTACTGCTTCAAGTCCGTTGCCCAATGTAGTATATGCTCATATTCAGCCTCCACCAAGG
AGTAATTCTGTTGCAGAGCCTCCTGACATATTTACTTCCGCTTCACCCCTGCCATCTTCA
TCTTCTGAAGGGATTCATTCTTCAAAATTCTGGACTCTCCTGCTGTTTTTACTCGTACTA
CATCCATAG

Peptide Sequence

PEP ID

XP_016481916.1
PEP Infomation

PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1G-like isoform X2 [Nicotiana tabacum]
Sequence

MGKGEEEQSAGTPLDAQSTHQNAEDRCRGCSRLKGLLSFKCVFVLLLGMGVLLSAIFLLP
FFKNGDLGYLDLDNKYKGHDIVASFMLEKPVPFVKDHIVQLADDIFDEISVSNTKVEIIS
LENIAGSNITEVVFAVDSAVKNIRVSLTALSLVRSEFETVITGQSALHLTASLFGDPFSF
DVLKFRGGITVSPKQSGFLMQQVQILFNFTLNFSIDEIQDNFHELTSQLKSGLHLSSYEN
LYISLTNTRGSTVDPPTIVQCKVLLSVGINSTRSRLKQLSQTIGSHSDNLGLNNTVFGRV
KQVSLSSFLPHSRGGDSGSPSPSPAPLPHHHYHHHHHHNRDSNLAPAISPAPKVERGGSI
SRKISPIYAPVPASVTILAPAPTPAKHKSHEAQPPCHFGRYPRKAKSRSHMVPSRAPIRA
PHIIPSPHQQIHAPDPIPHGLTASSPLPNVVYAHIQPPPRSNSVAEPPDIFTSASPLPSS
SSEGIHSSKFWTLLLFLLVLHP

Transcript Sequence

Gene sequence data has not been registered.